Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCATATATTGTATGCA
.....(((((((((((((((((&))))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001001436
GeneSymbolC16orf87
Binding site6760,6779
Score0.865
Seed0
Au0.75
Energy-18.3
Binding len19
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure