Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGATGGCCGTTCGGCATCCTGACATCGAGGCCCAGGAGAGAGGAGTCCGGTGT
(((((((((((((((((((...&.))))))))...))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001001438
GeneSymbolLSS
Binding site2003,2057
Score0.923
Seed1
Au0.426
Energy-29.6
Binding len25
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure