Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCTGCTGCAAGCCCATGTGCTGCTGTGTGCCAGC
..((((((((((..((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001001480
GeneSymbolKRTAP5-5
Binding site261,299
Score0.923
Seed1
Au0.397
Energy-19.9
Binding len16
Me-7.103
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure