Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCACTGATTGCTGAGGTAGAGCAGCTTCCAGAAGGGAGAGCTTCTCCAGTA
.(((((((((((((((((....&.)))))))))))).......))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001347921
GeneSymbolSNX19
Binding site1409,1464
Score0.923
Seed1
Au0.485
Energy-24.2
Binding len26
Me-3.793
Phylopstem1.5637302083333335
Phylopflank1.57304487
Longest consecutive pairings12
Position of longest consecutive pairings13
Pairings in 3prime end4
PositionCDS
2D Structure