Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTTCATCGGCTACAGTAGTACCATCTTTCTGTATGTCAGGC
.(((((((((((....((((..&.))))...))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001001667
GeneSymbolOR6V1
Binding site734,778
Score1.0
Seed1
Au0.5
Energy-19.5
Binding len20
Me-6.908
Phylopstem-0.10700629090909096
Phylopflank0.19288749124999993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure