Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCACACAGGCCCGGCTGCGGA
(((((((((.(((((((((((&))))).)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347921
GeneSymbolSNX19
Binding site29,54
Score0.846
Seed1
Au0.265
Energy-23.8
Binding len25
Me-5.18
Phylopstem-0.8869159533333332
Phylopflank-0.1605223255263158
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure