Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAGCTGCAGCTGTC
..((((((((((((.(.....&).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347921
GeneSymbolSNX19
Binding site364,379
Score1.0
Seed1
Au0.412
Energy-21.1
Binding len15
Me-5.692
Phylopstem1.924399166666667
Phylopflank2.928816169999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure