Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGTGCATCGCCTGCCGGGG
.(((((((..(.(((((.(((.&))).))))).)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001002026
GeneSymbolCLDN18
Binding site625,646
Score0.808
Seed1
Au0.456
Energy-19.6
Binding len21
Me-9.439
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure