Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCTAACTTGCCAGTGG
(((((((........((((((.&))))))......))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001002032
GeneSymbolJPT1
Binding site985,1005
Score0.923
Seed1
Au0.426
Energy-20.5
Binding len20
Me-17.603
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure