Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTAGCAGCTTCATGCCATGCTTGCAAA
(((((((.(((((((((((((&)))))..))))))....))...))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047430264
GeneSymbolINTS6
Binding site3018,3049
Score0.846
Seed1
Au0.544
Energy-17.7
Binding len31
Me-6.251
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure