Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGGGACCATCCCCAGCTGCAT
.((((((((.((((.((((((&))))))..)))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047430277
GeneSymbolCHAMP1
Binding site2808,2834
Score0.923
Seed1
Au0.397
Energy-22.3
Binding len26
Me-5.771
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure