Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGAGACAGGGTGCTGGTGA
((((((((((((((((((....&)))))))..)))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001347927
GeneSymbolSNX19
Binding site8991,9013
Score0.923
Seed1
Au0.485
Energy-24.4
Binding len22
Me-3.938
Phylopstem0.05839939047619048
Phylopflank-0.267562245
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end4
Position3UTR
2D Structure