Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTACCTGGAGACCGAGAGCCATGA
((.(((((((((((((((((((&))))))))))))..).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001002878
GeneSymbolTHOC5
Binding site2238,2263
Score1.0
Seed0
Au0.441
Energy-22.3
Binding len25
Me-5.495
Phylopstem2.1322456363636366
Phylopflank3.770046513875
Longest consecutive pairings12
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure