Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACATTGTATGAATGGA
.((...((((((((((((....&))))))))))))...)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001002905
GeneSymbolOR8G1
Binding site1348,1366
Score0.846
Seed0
Au0.676
Energy-17.0
Binding len18
Me-12.845
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure