Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGCGCAATGGCGGCGGCCGCGGCGGAGCAGC
((((.(((((((((((.....&.)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047430300
GeneSymbolIPO5
Binding site12,47
Score0.846
Seed0
Au0.338
Energy-23.2
Binding len20
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end3
Position5UTR
2D Structure