Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAAGGTGCCCCTTCCTGAGGGTGT
(((((((.(((((((((((...&))))))))))).)))..........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001003665
GeneSymbolSTUM
Binding site4333,4363
Score0.846
Seed1
Au0.382
Energy-27.4
Binding len30
Me-6.251
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings19
Pairings in 3prime end5
Position3UTR
2D Structure