Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTTGTCAAACACATTAGACAACATTGCTTACATCATGCCGGGA
.((((((((...((((((....&.)))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001003681
GeneSymbolHMGXB4
Binding site1886,1933
Score0.923
Seed1
Au0.559
Energy-17.8
Binding len17
Me-11.207
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure