Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCTTCCTGCTGCTGCAGT
(((((((.((((..(..((((&))))..)..)).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347927
GeneSymbolSNX19
Binding site5197,5220
Score0.923
Seed1
Au0.456
Energy-21.2
Binding len23
Me-8.63
Phylopstem0.05280968571428573
Phylopflank0.07068945375000002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure