Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACTGCAAGATCCAGCAGCGCAGGCAGGAGCTGGA
..(((((((((.((((.((...&.)).)))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001003801
GeneSymbolSMARCD3
Binding site1519,1556
Score0.923
Seed1
Au0.397
Energy-23.2
Binding len19
Me-8.304
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure