Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGAGGGATGTGCAGAATGTGGCAGCCGCCCCAGAGCTGGCGA
(.(((((((((((((((((((.&))))))))))))..........................))))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004128
GeneSymbolQSOX1
Binding site1687,1735
Score0.846
Seed1
Au0.353
Energy-25.7
Binding len48
Me-5.101
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings36
Pairings in 3prime end7
PositionCDS
2D Structure