Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCAGAGGTGGAGGTTGGAAGGGGTAGCAGGGAGAGGGGTTGGTGT
((((((((((((((((((((((&))))))))))...........................)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004317
GeneSymbolLIN28B
Binding site3826,3876
Score0.846
Seed1
Au0.471
Energy-27.0
Binding len50
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure