Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGCCAGAGAAGGAGCTCGCCCCTGAGCCTGAGGAGACCTGGGTGG
(((((((((((((((((.(...&).))))))).))))))........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004351
GeneSymbolSPDYE3
Binding site809,854
Score0.846
Seed1
Au0.382
Energy-21.8
Binding len45
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings36
Pairings in 3prime end4
PositionCDS
2D Structure