Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAAGATGCTCATCAATCTACTTTCTGTGGCCAGG
..((((((.(..((((((((((&)))))))).))....................).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004472
GeneSymbolOR10R2
Binding site290,330
Score0.923
Seed1
Au0.544
Energy-20.3
Binding len40
Me-12.185
Phylopstem-0.027988727272727165
Phylopflank-0.8368332499999999
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end8
PositionCDS
2D Structure