Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATGCCGGA
..((((((((((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001004485
GeneSymbolOR13F1
Binding site829,840
Score1.0
Seed1
Au0.588
Energy-16.7
Binding len11
Me-8.071
Phylopstem-0.022857634999999998
Phylopflank1.4093306456250005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure