Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGCCCTGGAGCA
.....(((((...((((((((.&))))))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004487
GeneSymbolOR13J1
Binding site56,74
Score0.923
Seed0
Au0.471
Energy-23.9
Binding len18
Me-21.126
Phylopstem2.176774875
Phylopflank0.811365035
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure