Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGGTGGGATCCTGTGT
(((.((.((((.(((((((...&))))))).)))).)).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004701
GeneSymbolOR4C16
Binding site435,455
Score0.808
Seed0
Au0.515
Energy-20.1
Binding len20
Me-11.86
Phylopstem0.37726028571428577
Phylopflank-1.83440024375
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure