Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGTGACAGGGAAGCTGGGTTTGCAGGGGGCCCGTGG
(((.(((((((((((((((...&))))))))......................))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004713
GeneSymbolOR1I1
Binding site5299,5341
Score0.846
Seed0
Au0.368
Energy-26.4
Binding len42
Me-6.97
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings34
Pairings in 3prime end5
Position3UTR
2D Structure