Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTCCTAGAAAGGACTGAGTGA
((((.(.(((((((((((.((.&)).))))))))))).).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004728
GeneSymbolOR5A1
Binding site5418,5440
Score1.0
Seed0
Au0.529
Energy-24.7
Binding len22
Me-9.6
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure