Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGCACTGTACGGCGGCTGCGC
.(((((((((.(((((..(((&)))..)))....)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347943
GeneSymbolBTBD11
Binding site1029,1054
Score0.923
Seed1
Au0.309
Energy-23.3
Binding len25
Me-6.618
Phylopstem1.7706542
Phylopflank3.7219441699999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure