Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCTCCAGCTGGCAGCTGCT
..(((((((((((((...(((&)))....)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347943
GeneSymbolBTBD11
Binding site2576,2598
Score0.846
Seed1
Au0.382
Energy-22.9
Binding len22
Me-5.19
Phylopstem3.454074714285714
Phylopflank4.93753054625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure