Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTTGATGTGTGAACTGTCATTAGCCCATCGCAGTTGTGTGTGAGGC
.(((.(((((((((...(((..&.)))...))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001004734
GeneSymbolOR14I1
Binding site1939,1989
Score0.846
Seed0
Au0.5
Energy-19.6
Binding len21
Me-8.881
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end3
Position3UTR
2D Structure