Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAGGACCTGTCTAAATTCCCAGAAAGCAATTGTCAAGTGCTCCAGGTTAGCCAGC
..((((((.(((((((((((((&.))))....)))))))))......................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004736
GeneSymbolOR5K1
Binding site2239,2297
Score1.0
Seed1
Au0.485
Energy-21.4
Binding len47
Me-6.013
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end8
Position3UTR
2D Structure