Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTGAAGAGAGCTG
....(((((.((((.((((((.&)))))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004740
GeneSymbolOR5M1
Binding site3743,3760
Score1.0
Seed0
Au0.632
Energy-18.6
Binding len17
Me-11.525
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure