Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTATGGTACTCTGATCTTCATGTATCTCAGACGTCCCACAGAGGAGTCTGTGG
(((.(((((((((.((((....&.)))).))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004742
GeneSymbolOR5M3
Binding site921,975
Score0.846
Seed0
Au0.485
Energy-24.4
Binding len20
Me-7.826
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure