Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTGAAGGGAGGAGAAAAGTCTTCTCCACATGTGG
(((((((((((((((.((((((&))))))..)))))))))...........)))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001004746
GeneSymbolOR5T2
Binding site962,1000
Score0.923
Seed1
Au0.559
Energy-20.5
Binding len38
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure