Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTACTGCTATCTGGAAGGCAGAGCCAGG
..(((((((((((((((((((.&.))))))))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001005171
GeneSymbolOR52K1
Binding site5066,5098
Score1.0
Seed1
Au0.515
Energy-27.6
Binding len23
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure