Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGAAGGCTGAGCCC
....((((((((((((((....&)))))))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001005238
GeneSymbolOR51G2
Binding site85,102
Score0.966
Seed0
Au0.485
Energy-22.5
Binding len17
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
Position5UTR
2D Structure