Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGCCCCGCAAGTATAAGAAGAAGAAGAAGGAGCTACAGGGTGA
(((((((((((((((((((((.&)))))))).......................)))))))))....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001005273
GeneSymbolCHD3
Binding site2286,2335
Score0.923
Seed1
Au0.5
Energy-27.6
Binding len49
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure