Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTGCAGCAGATGCAAA
((((((((((((((.......&)))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347946
GeneSymbolIFT81
Binding site863,881
Score1.0
Seed1
Au0.5
Energy-18.8
Binding len18
Me-4.906
Phylopstem3.62013305882353
Phylopflank4.485495701125
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end1
PositionCDS
2D Structure