Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCATATGTTGAAATCACCACCTTCTTCTTGGTTGGGATGCCAGGG
.((((((((.((((..(((...&.)))..))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001005329
GeneSymbolOR51A4
Binding site140,186
Score0.846
Seed1
Au0.544
Energy-20.3
Binding len21
Me-6.004
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure