Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACACAGTTGCCATCTCCCAGAAACTCTGTGCCATGCTGGTGG
(((((((...((((((((.(((&.)))))))))))...........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001005496
GeneSymbolOR5D16
Binding site397,442
Score0.923
Seed1
Au0.485
Energy-20.7
Binding len31
Me-8.55
Phylopstem-2.358361875
Phylopflank-0.27749448125
Longest consecutive pairings11
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure