Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTAATACCGGTGTCTTTGGATTTAGCTTCTTGCTGCTGACAGTTGCT
..(((((((((((.((((((.&.)))))).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047431010
GeneSymbolSLC38A6
Binding site243,291
Score0.846
Seed1
Au0.529
Energy-22.5
Binding len21
Me-5.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure