Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAAGGCATGCTGGGTA
(((((((((.(..((((((...&))))))..).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001005747
GeneSymbolCACNB4
Binding site7819,7839
Score0.923
Seed1
Au0.618
Energy-20.1
Binding len20
Me-9.816
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure