Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCCCTCCGGACCCTATTCCCAAGCATCTGCAGCTGCC
..((((((((((.(((..((.&.))..))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001347952
GeneSymbolRPH3A
Binding site1271,1312
Score0.904
Seed1
Au0.294
Energy-25.3
Binding len20
Me-6.246
Phylopstem0.10320072000000002
Phylopflank0.7482874500000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure