Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTG
((((((((..(...(((((...&.)))))...)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001005862
GeneSymbolERBB2
Binding site604,641
Score0.923
Seed1
Au0.382
Energy-21.2
Binding len21
Me-11.729
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure