Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCTGCTGCAAGCCCATGTGCTGCTGTGTGCCAGC
..((((((((((..((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001005922
GeneSymbolKRTAP5-1
Binding site433,471
Score0.846
Seed1
Au0.397
Energy-19.9
Binding len16
Me-7.103
Phylopstem-0.3075645
Phylopflank-0.44845464874999996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure