Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTAGATAACTGTATGCTGTC
..((((((((((((((..(((&)))..))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047431048
GeneSymbolMDGA2
Binding site3583,3604
Score0.846
Seed1
Au0.588
Energy-19.4
Binding len21
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure