Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTATGTTCACATGCCTGTAGTACCTGCAAACCATGCCAGGTT
(((((((((....(((((....&.)))))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001007097
GeneSymbolNTRK2
Binding site6704,6750
Score0.923
Seed1
Au0.559
Energy-20.6
Binding len20
Me-12.641
Phylopstem0.07920466666666666
Phylopflank-0.04092158750000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure