Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGACTGCTGCTTGTGTGTTGCCGGCCAGGA
.((((((((((((.((((....&.)))))))))).......)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001007229
GeneSymbolSPOP
Binding site947,977
Score0.846
Seed1
Au0.441
Energy-18.9
Binding len25
Me-4.65
Phylopstem1.298703
Phylopflank2.04087012375
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end4
PositionCDS
2D Structure