Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTACCACCTCCGCCAGGA
.((((((.......((((((((&)))))))).......)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001007237
GeneSymbolIGSF3
Binding site1830,1852
Score0.846
Seed1
Au0.471
Energy-18.8
Binding len22
Me-16.723
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure